`mod bayes_profile`¶

module bayes_profile¶

Versioned Bayesian configuration with validation and parameter provenance.

Enums

enum ParameterSource¶

InputProfile¶

NamedProfile¶

Cli¶

Derived¶

enum PrevalencePriorProfile¶

Fixed¶

probability: f64¶

Beta¶

alpha: f64¶

beta: f64¶

Implementations

impl PrevalencePriorProfile¶

enum ProfileError¶

Parse(toml::de::Error)¶

Encode(toml::ser::Error)¶

InvalidValue¶

field: &'static str¶

reason: String¶

Traits implemented

impl Display for ProfileError¶

impl Error for ProfileError¶

impl From<toml::de::Error> for ProfileError¶

impl From<toml::ser::Error> for ProfileError¶

Structs and Unions

struct BayesFactorProfile¶

alternative_group1: BetaPriorProfile¶

alternative_group2: BetaPriorProfile¶

null: BetaPriorProfile¶

Implementations

impl BayesFactorProfile¶

Functions

const fn uniform_v1() -> Self¶

struct BayesProfile¶

schema_version: u32¶

profile_name: String¶

model_id: String¶

model_version: u32¶

observation: ObservationProfile¶

model: ModelProfile¶

estimation: EstimationProfile¶

decision: DecisionProfile¶

execution: ExecutionProfile¶

struct BayesProfileInput¶

schema_version: u32¶

profile_name: String¶

model_id: String¶

model_version: u32¶

observation: ObservationProfile¶

model: ModelProfile¶

estimation: EstimationProfile¶

decision: DecisionProfile¶

execution: ExecutionProfile¶

Implementations

impl BayesProfileInput¶

Functions

fn hydrate(&self, overrides: &ProfileOverrides) -> Result<HydratedBayesProfile, ProfileError>¶

fn parse_toml(input: &str) -> Result<Self, ProfileError>¶

struct BetaPriorProfile¶

alpha: f64¶

beta: f64¶

Implementations

impl BetaPriorProfile¶

Functions

const fn uniform() -> Self¶

struct DecisionProfile¶

posterior_threshold: f64¶

bayes_factor_threshold: f64¶

significance_threshold: f64¶

correction: String¶

struct EstimationProfile¶

linkage_prior: String¶

max_iterations: u32¶

tolerance: f64¶

minimum_probability: f64¶

maximum_probability: f64¶

struct ExecutionProfile¶

test: String¶

pvalue_backend: String¶

struct HydratedBayesProfile¶

profile: BayesProfile¶

Implementations

impl HydratedBayesProfile¶

Functions

fn digest_sha256(&self) -> String¶

fn source_for(&self, field: &str) -> Option<ParameterSource>¶

fn to_toml(&self) -> Result<String, ProfileError>¶

struct ModelProfile¶

linkage_prior: f64¶

linked_prevalence: f64¶

null_prevalence: f64¶

group1_linked_weight: f64¶

posterior: Option<PosteriorProfile>¶

bayes_factor: BayesFactorProfile¶

Implementations

impl ModelProfile¶

Functions

fn to_runtime(&self) -> Result<DirectionalModel, ProfileError>¶

struct ObservationProfile¶

group1: String¶

group2: String¶

min_depth: u32¶

struct PosteriorProfile¶

linked: PrevalencePriorProfile¶

null: PrevalencePriorProfile¶

Implementations

impl PosteriorProfile¶

Functions

const fn fixed(linked_probability: f64, null_probability: f64) -> Self¶

struct ProfileOverrides¶

linkage_prior: Option<f64>¶

linked_prevalence: Option<f64>¶

null_prevalence: Option<f64>¶

group1_linked_weight: Option<f64>¶

posterior_threshold: Option<f64>¶

bayes_factor_threshold: Option<f64>¶

significance_threshold: Option<f64>¶

test: Option<String>¶

pvalue_backend: Option<String>¶

mod bayes_profile¶

`mod bayes_profile`¶